Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 NFYC-AS1-201ENST00000606277 1687 ntBASIC14.34□□□□□ -0.11
NKX6-2Q9C056 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.34□□□□□ -0.11
NKX6-2Q9C056 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NKX6-2Q9C056 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 FAM45BP-202ENST00000592932 1624 ntBASIC14.33□□□□□ -0.11
NKX6-2Q9C056 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 KRT8P45-201ENST00000414328 1447 ntBASIC14.33□□□□□ -0.11
NKX6-2Q9C056 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 AL365209.1-201ENST00000624418 6473 ntBASIC14.33□□□□□ -0.11
NKX6-2Q9C056 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NKX6-2Q9C056 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 TSPY23P-201ENST00000440136 739 ntBASIC14.33□□□□□ -0.12
NKX6-2Q9C056 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 PLD4-205ENST00000553861 667 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 AC068587.9-201ENST00000641814 219 ntBASIC14.33□□□□□ -0.12
NKX6-2Q9C056 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
NKX6-2Q9C056 AC126755.1-201ENST00000525846 6405 ntBASIC14.33□□□□□ -0.12
NKX6-2Q9C056 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 MTMR9LP-203ENST00000426597 1545 ntBASIC14.32□□□□□ -0.12
NKX6-2Q9C056 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 AL160286.2-201ENST00000567150 934 ntBASIC14.32□□□□□ -0.12
NKX6-2Q9C056 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX6-2Q9C056 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms