Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 PFN1P12-201ENST00000455938 534 ntBASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AC135586.1-201ENST00000539323 574 ntBASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AP000842.3-202ENST00000569238 1080 ntBASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AL844908.2-201ENST00000609461 460 ntBASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AC087499.5-201ENST00000452760 1342 ntBASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.66■□□□□ 0.42
COL25A1Q9BXS0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 AC007389.4-201ENST00000454674 793 ntBASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 AP001889.1-201ENST00000525414 633 ntBASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 PKD1P6-201ENST00000343738 4769 ntBASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COL25A1Q9BXS0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
COL25A1Q9BXS0 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 AC093525.8-201ENST00000624099 1342 ntBASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
COL25A1Q9BXS0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 IRX1P1-201ENST00000438849 1838 ntBASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 MTMR9LP-203ENST00000426597 1545 ntBASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 SPDYE19P-201ENST00000338590 713 ntBASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AC234644.1-201ENST00000406065 370 ntBASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
COL25A1Q9BXS0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms