Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 KRASP1-201ENST00000407852 552 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 AC239809.2-201ENST00000415381 517 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 AC133681.1-201ENST00000465482 601 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 AC026271.3-201ENST00000571884 352 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 AC130371.2-201ENST00000619443 611 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 AL023875.1-201ENST00000640777 796 ntBASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
SSBP4Q9BWG4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 AP003097.1-201ENST00000530657 1135 ntBASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 AC011298.2-201ENST00000617989 482 ntBASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 AL109923.1-201ENST00000618799 583 ntBASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ABBA01031674.1-201ENST00000635145 728 ntBASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SSBP4Q9BWG4 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC133963.1-201ENST00000504166 1679 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 SDHAP2-201ENST00000455183 2001 ntBASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP4Q9BWG4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms