Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SMOQ99835 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SMOQ99835 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SMOQ99835 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.5■□□□□ 0.55
SMOQ99835 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMOQ99835 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 RNF165-205ENST00000588679 2904 ntBASIC18.49■□□□□ 0.55
SMOQ99835 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 AC003669.1-201ENST00000334569 611 ntBASIC18.49■□□□□ 0.55
SMOQ99835 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 KLF4P1-201ENST00000412782 1185 ntBASIC18.49■□□□□ 0.55
SMOQ99835 AL020989.1-201ENST00000422979 469 ntBASIC18.49■□□□□ 0.55
SMOQ99835 AF186996.4-201ENST00000467186 377 ntBASIC18.49■□□□□ 0.55
SMOQ99835 AC073648.2-201ENST00000510116 352 ntBASIC18.49■□□□□ 0.55
SMOQ99835 AL662844.1-201ENST00000546340 181 ntBASIC18.49■□□□□ 0.55
SMOQ99835 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.49■□□□□ 0.55
SMOQ99835 MTDHP4-201ENST00000600287 670 ntBASIC18.49■□□□□ 0.55
SMOQ99835 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 AC134043.2-201ENST00000624206 2238 ntBASIC18.49■□□□□ 0.55
SMOQ99835 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.49■□□□□ 0.55
SMOQ99835 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
SMOQ99835 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMOQ99835 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.48■□□□□ 0.55
SMOQ99835 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
SMOQ99835 STK19B-204ENST00000512515 211 ntBASIC18.48■□□□□ 0.55
SMOQ99835 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.48■□□□□ 0.55
SMOQ99835 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.48■□□□□ 0.55
SMOQ99835 AL773604.1-201ENST00000617417 272 ntBASIC18.48■□□□□ 0.55
SMOQ99835 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 AL133373.2-201ENST00000623187 2828 ntBASIC18.48■□□□□ 0.55
SMOQ99835 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.48■□□□□ 0.55
SMOQ99835 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMOQ99835 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.48■□□□□ 0.55
SMOQ99835 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 AC068880.1-201ENST00000507289 2297 ntBASIC18.47■□□□□ 0.55
SMOQ99835 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.47■□□□□ 0.55
SMOQ99835 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 AL031284.1-201ENST00000419297 478 ntBASIC18.47■□□□□ 0.55
SMOQ99835 RPS2P1-201ENST00000434010 821 ntBASIC18.47■□□□□ 0.55
SMOQ99835 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 PRYP5-201ENST00000451909 266 ntBASIC18.47■□□□□ 0.55
SMOQ99835 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMOQ99835 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.47■□□□□ 0.55
SMOQ99835 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.47■□□□□ 0.55
SMOQ99835 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.47■□□□□ 0.55
SMOQ99835 AL049840.3-201ENST00000602669 611 ntBASIC18.47■□□□□ 0.55
SMOQ99835 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms