Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCL13Q99616 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CCL13Q99616 AC007967.3-201ENST00000434308 558 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 DDX43P3-201ENST00000441064 443 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL13Q99616 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
CCL13Q99616 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.82□□□□□ -0.04
CCL13Q99616 FOSL1P1-201ENST00000511041 816 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 AC009533.2-201ENST00000543664 586 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.82□□□□□ -0.04
CCL13Q99616 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.82□□□□□ -0.04
CCL13Q99616 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL13Q99616 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL13Q99616 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CCL13Q99616 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC14.82□□□□□ -0.04
CCL13Q99616 TP73-AS1-210ENST00000637775 1455 ntBASIC14.82□□□□□ -0.04
CCL13Q99616 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CCL13Q99616 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CCL13Q99616 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL13Q99616 NUS1P2-201ENST00000417358 873 ntBASIC14.81□□□□□ -0.04
CCL13Q99616 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL13Q99616 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL13Q99616 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL13Q99616 PRELID1P1-202ENST00000567272 903 ntBASIC14.81□□□□□ -0.04
CCL13Q99616 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL13Q99616 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.81□□□□□ -0.04
CCL13Q99616 BNIP3P18-201ENST00000593976 575 ntBASIC14.81□□□□□ -0.04
CCL13Q99616 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.81□□□□□ -0.04
CCL13Q99616 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL13Q99616 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.81□□□□□ -0.04
CCL13Q99616 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCL13Q99616 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
CCL13Q99616 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 CLEC4GP1-201ENST00000596555 870 ntBASIC14.8□□□□□ -0.04
CCL13Q99616 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.8□□□□□ -0.04
CCL13Q99616 AC012313.10-201ENST00000623509 926 ntBASIC14.8□□□□□ -0.04
CCL13Q99616 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CCL13Q99616 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.8□□□□□ -0.04
CCL13Q99616 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL13Q99616 BX276092.7-203ENST00000637198 1536 ntBASIC14.8□□□□□ -0.04
CCL13Q99616 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCL13Q99616 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.8□□□□□ -0.04
CCL13Q99616 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCL13Q99616 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC14.8□□□□□ -0.04
CCL13Q99616 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCL13Q99616 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms