Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.75■□□□□ 0.43
NDNQ99608 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 AC112907.2-201ENST00000448639 330 ntBASIC17.75■□□□□ 0.43
NDNQ99608 VENTXP5-201ENST00000523979 775 ntBASIC17.75■□□□□ 0.43
NDNQ99608 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.75■□□□□ 0.43
NDNQ99608 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.75■□□□□ 0.43
NDNQ99608 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.75■□□□□ 0.43
NDNQ99608 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.75■□□□□ 0.43
NDNQ99608 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NDNQ99608 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NDNQ99608 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
NDNQ99608 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.75■□□□□ 0.43
NDNQ99608 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDNQ99608 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 AC108860.2-201ENST00000562760 2183 ntBASIC17.74■□□□□ 0.43
NDNQ99608 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NDNQ99608 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NDNQ99608 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 HBZP1-201ENST00000354915 429 ntBASIC17.74■□□□□ 0.43
NDNQ99608 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 AP003733.1-201ENST00000491725 852 ntBASIC17.74■□□□□ 0.43
NDNQ99608 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.74■□□□□ 0.43
NDNQ99608 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.74■□□□□ 0.43
NDNQ99608 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 ZNF444P1-201ENST00000559497 298 ntBASIC17.74■□□□□ 0.43
NDNQ99608 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.74■□□□□ 0.43
NDNQ99608 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NDNQ99608 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.74■□□□□ 0.43
NDNQ99608 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDNQ99608 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NDNQ99608 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.73■□□□□ 0.43
NDNQ99608 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NDNQ99608 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NDNQ99608 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.73■□□□□ 0.43
NDNQ99608 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NDNQ99608 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 TSPY12P-201ENST00000421279 868 ntBASIC17.73■□□□□ 0.43
NDNQ99608 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.73■□□□□ 0.43
NDNQ99608 AC104076.2-201ENST00000448912 469 ntBASIC17.73■□□□□ 0.43
NDNQ99608 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.73■□□□□ 0.43
NDNQ99608 HOMER2P1-201ENST00000455653 964 ntBASIC17.73■□□□□ 0.43
NDNQ99608 AC092647.4-201ENST00000457211 535 ntBASIC17.73■□□□□ 0.43
NDNQ99608 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.73■□□□□ 0.43
NDNQ99608 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.73■□□□□ 0.43
NDNQ99608 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.73■□□□□ 0.43
NDNQ99608 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
NDNQ99608 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDNQ99608 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms