Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDK5RAP1Q96SZ6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 AC021087.4-201ENST00000563761 564 ntBASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.32■□□□□ 0.52
CDK5RAP1Q96SZ6 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 AL031284.1-201ENST00000419297 478 ntBASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 STK25P1-201ENST00000585406 838 ntBASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 LINC01451-201ENST00000623792 534 ntBASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDK5RAP1Q96SZ6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 HLA-A-201ENST00000376802 1334 ntBASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 SIGLEC30P-201ENST00000455569 941 ntBASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 MTDHP4-201ENST00000600287 670 ntBASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 AC132938.5-201ENST00000624980 1813 ntBASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDK5RAP1Q96SZ6 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms