Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RPS15-203ENST00000586096 570 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 TMEM191A-211ENST00000637163 1067 ntBASIC14.35□□□□□ -0.11
RAB40CQ96S21 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RAB40CQ96S21 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAB40CQ96S21 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 WWOX-216ENST00000569818 525 ntBASIC14.34□□□□□ -0.11
RAB40CQ96S21 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.34□□□□□ -0.11
RAB40CQ96S21 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RAB40CQ96S21 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40CQ96S21 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB40CQ96S21 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RAB40CQ96S21 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.33□□□□□ -0.11
RAB40CQ96S21 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.33□□□□□ -0.11
RAB40CQ96S21 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 GCSHP5-201ENST00000443090 522 ntBASIC14.33□□□□□ -0.12
RAB40CQ96S21 UBE2SP1-201ENST00000450587 669 ntBASIC14.33□□□□□ -0.12
RAB40CQ96S21 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 AC098590.1-201ENST00000468126 897 ntBASIC14.33□□□□□ -0.12
RAB40CQ96S21 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 AC112497.1-201ENST00000624824 639 ntBASIC14.33□□□□□ -0.12
RAB40CQ96S21 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 AC009949.1-201ENST00000623048 1830 ntBASIC14.33□□□□□ -0.12
RAB40CQ96S21 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
RAB40CQ96S21 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RAB40CQ96S21 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms