Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 AD000864.1-201ENST00000624076 2295 ntBASIC16.73■□□□□ 0.27
COL21A1Q96P44 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.73■□□□□ 0.27
COL21A1Q96P44 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
COL21A1Q96P44 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 AC005332.1-201ENST00000577698 1310 ntBASIC16.72■□□□□ 0.27
COL21A1Q96P44 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 IGHGP-201ENST00000390555 1178 ntBASIC16.72■□□□□ 0.27
COL21A1Q96P44 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
COL21A1Q96P44 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 TNRC18P3-201ENST00000441896 2691 ntBASIC16.71■□□□□ 0.27
COL21A1Q96P44 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 GPR32P1-201ENST00000601788 811 ntBASIC16.71■□□□□ 0.27
COL21A1Q96P44 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.71■□□□□ 0.27
COL21A1Q96P44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 PP12613-201ENST00000424958 2230 ntBASIC16.71■□□□□ 0.27
COL21A1Q96P44 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
COL21A1Q96P44 AL355312.1-201ENST00000407115 2176 ntBASIC16.71■□□□□ 0.27
COL21A1Q96P44 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
COL21A1Q96P44 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.71■□□□□ 0.26
COL21A1Q96P44 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.71■□□□□ 0.26
COL21A1Q96P44 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
COL21A1Q96P44 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms