Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 AC009154.2-201ENST00000621177 724 ntBASIC17.05■□□□□ 0.32
RNF31Q96EP0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF31Q96EP0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RNF31Q96EP0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 FGFR3P6-201ENST00000457012 610 ntBASIC17.04■□□□□ 0.32
RNF31Q96EP0 RNPS1P1-201ENST00000507437 918 ntBASIC17.04■□□□□ 0.32
RNF31Q96EP0 POLD2P1-201ENST00000511220 997 ntBASIC17.04■□□□□ 0.32
RNF31Q96EP0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 AC023511.2-201ENST00000618803 211 ntBASIC17.04■□□□□ 0.32
RNF31Q96EP0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.04■□□□□ 0.32
RNF31Q96EP0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF31Q96EP0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF31Q96EP0 AL354751.1-201ENST00000412768 1863 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 PHGDH-209ENST00000641074 1780 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 KRT18P67-201ENST00000432816 1264 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 AC112698.1-201ENST00000510299 916 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 SART3-203ENST00000546611 1184 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 AL138831.2-201ENST00000606564 490 ntBASIC17.03■□□□□ 0.32
RNF31Q96EP0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF31Q96EP0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF31Q96EP0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms