Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VPS33AQ96AX1 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS33AQ96AX1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VPS33AQ96AX1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS33AQ96AX1 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS33AQ96AX1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17■□□□□ 0.31
VPS33AQ96AX1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 EGLN1P1-201ENST00000531623 762 ntBASIC17■□□□□ 0.31
VPS33AQ96AX1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC008687.5-201ENST00000593746 558 ntBASIC17■□□□□ 0.31
VPS33AQ96AX1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS33AQ96AX1 AC116407.2-201ENST00000613639 860 ntBASIC17■□□□□ 0.31
VPS33AQ96AX1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17■□□□□ 0.31
VPS33AQ96AX1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS33AQ96AX1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17■□□□□ 0.31
VPS33AQ96AX1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17■□□□□ 0.31
VPS33AQ96AX1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17■□□□□ 0.31
VPS33AQ96AX1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
VPS33AQ96AX1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 CYP2D8P-201ENST00000433633 1490 ntBASIC16.99■□□□□ 0.31
VPS33AQ96AX1 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 LINC01451-201ENST00000623792 534 ntBASIC16.99■□□□□ 0.31
VPS33AQ96AX1 AL157888.1-201ENST00000631930 593 ntBASIC16.99■□□□□ 0.31
VPS33AQ96AX1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 AC092865.7-201ENST00000641832 219 ntBASIC16.99■□□□□ 0.31
VPS33AQ96AX1 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 UBALD1-205ENST00000590891 2641 ntBASIC16.99■□□□□ 0.31
VPS33AQ96AX1 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
VPS33AQ96AX1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 KRT8P9-201ENST00000558927 1449 ntBASIC16.98■□□□□ 0.31
VPS33AQ96AX1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 PVRIG2P-201ENST00000435460 978 ntBASIC16.98■□□□□ 0.31
VPS33AQ96AX1 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 SNORA78-201ENST00000459373 127 ntBASIC16.98■□□□□ 0.31
VPS33AQ96AX1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.98■□□□□ 0.31
VPS33AQ96AX1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms