Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 AC002056.1-201ENST00000395613 760 ntBASIC21.47■■□□□ 1.03
CNKSR1Q969H4 PMS2P4-201ENST00000412466 1052 ntBASIC21.47■■□□□ 1.03
CNKSR1Q969H4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CNKSR1Q969H4 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 TIMM8BP1-201ENST00000452384 211 ntBASIC21.46■■□□□ 1.03
CNKSR1Q969H4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 ACTL9-202ENST00000612068 1252 ntBASIC21.46■■□□□ 1.03
CNKSR1Q969H4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CNKSR1Q969H4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
CNKSR1Q969H4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 DUX4L27-201ENST00000554796 1261 ntBASIC21.45■■□□□ 1.02
CNKSR1Q969H4 AC026120.1-201ENST00000611536 926 ntBASIC21.45■■□□□ 1.02
CNKSR1Q969H4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 AC073592.3-201ENST00000625118 1834 ntBASIC21.45■■□□□ 1.02
CNKSR1Q969H4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CNKSR1Q969H4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 AC093214.1-201ENST00000511688 1107 ntBASIC21.44■■□□□ 1.02
CNKSR1Q969H4 FAM86C2P-203ENST00000528684 1004 ntBASIC21.44■■□□□ 1.02
CNKSR1Q969H4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 AC100803.2-201ENST00000562459 1963 ntBASIC21.44■■□□□ 1.02
CNKSR1Q969H4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CNKSR1Q969H4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 AC009949.1-201ENST00000623048 1830 ntBASIC21.43■■□□□ 1.02
CNKSR1Q969H4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 AL096828.2-201ENST00000567259 1965 ntBASIC21.43■■□□□ 1.02
CNKSR1Q969H4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CNKSR1Q969H4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms