Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 VN2R19P-201ENST00000442399 1052 ntBASIC17.66■□□□□ 0.42
HMGB4Q8WW32 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 RPS15P9-201ENST00000494093 319 ntBASIC17.66■□□□□ 0.42
HMGB4Q8WW32 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AC109462.3-201ENST00000573934 613 ntBASIC17.66■□□□□ 0.42
HMGB4Q8WW32 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
HMGB4Q8WW32 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 AP006288.1-201ENST00000446065 395 ntBASIC17.65■□□□□ 0.42
HMGB4Q8WW32 ALG1L5P-201ENST00000482043 771 ntBASIC17.65■□□□□ 0.42
HMGB4Q8WW32 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 AC004790.2-201ENST00000623588 572 ntBASIC17.65■□□□□ 0.42
HMGB4Q8WW32 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.65■□□□□ 0.42
HMGB4Q8WW32 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGB4Q8WW32 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGB4Q8WW32 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HMGB4Q8WW32 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 SNHG9-202ENST00000564014 471 ntBASIC17.64■□□□□ 0.41
HMGB4Q8WW32 MIR4469-201ENST00000583919 79 ntBASIC17.64■□□□□ 0.41
HMGB4Q8WW32 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AC008667.4-201ENST00000607370 168 ntBASIC17.64■□□□□ 0.41
HMGB4Q8WW32 AC116407.2-201ENST00000613639 860 ntBASIC17.64■□□□□ 0.41
HMGB4Q8WW32 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms