Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 AC140113.2-201ENST00000604370 208 ntBASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 AC027601.4-201ENST00000611259 610 ntBASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 AD001527.2-201ENST00000622994 785 ntBASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SHKBP1Q8TBC3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 BX842568.4-201ENST00000421222 227 ntBASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 LAGE3P1-201ENST00000425356 484 ntBASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 Z83851.2-201ENST00000609564 659 ntBASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
SHKBP1Q8TBC3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SHKBP1Q8TBC3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 MED15P5-201ENST00000423150 992 ntBASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 AL356488.2-201ENST00000602755 427 ntBASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 AC073592.4-201ENST00000623827 446 ntBASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 AL022326.1-202ENST00000641533 845 ntBASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SHKBP1Q8TBC3 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 AC022898.2-201ENST00000616822 1312 ntBASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 AC004817.3-201ENST00000602957 2129 ntBASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SHKBP1Q8TBC3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms