Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AC104819.1-201ENST00000504587 486 ntBASIC18.17■□□□□ 0.5
PAF1Q8N7H5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 Z69720.1-201ENST00000601483 472 ntBASIC18.17■□□□□ 0.5
PAF1Q8N7H5 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.17■□□□□ 0.5
PAF1Q8N7H5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 ABALON-201ENST00000629058 1903 ntBASIC18.17■□□□□ 0.5
PAF1Q8N7H5 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.17■□□□□ 0.5
PAF1Q8N7H5 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 AC093010.1-201ENST00000473625 1624 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 LINC00167-201ENST00000530583 1419 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ATP5G2P1-201ENST00000433580 426 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 MINOS1P3-201ENST00000457048 203 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 KRT18P56-201ENST00000507275 550 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 AC126755.1-201ENST00000525846 6405 ntBASIC18.16■□□□□ 0.5
PAF1Q8N7H5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PAF1Q8N7H5 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 NEFHP1-201ENST00000412845 2629 ntBASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 PRELID1P1-202ENST00000567272 903 ntBASIC18.15■□□□□ 0.5
PAF1Q8N7H5 MIR3652-201ENST00000579335 131 ntBASIC18.15■□□□□ 0.5
PAF1Q8N7H5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 AC018470.1-201ENST00000624790 3129 ntBASIC18.15■□□□□ 0.5
PAF1Q8N7H5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PAF1Q8N7H5 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms