Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 KRT17P6-201ENST00000453795 1220 ntBASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 MINOS1P3-201ENST00000457048 203 ntBASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 AC092329.2-201ENST00000598402 547 ntBASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ATPAF2Q8N5M1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 HLA-J-201ENST00000462773 1622 ntBASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 AC074051.2-201ENST00000565115 352 ntBASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 LINC01451-201ENST00000623792 534 ntBASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
ATPAF2Q8N5M1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 COX5BP2-201ENST00000392354 334 ntBASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 AC104819.1-201ENST00000504587 486 ntBASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 AC009533.2-201ENST00000543664 586 ntBASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 NSUN5P1-202ENST00000421140 1535 ntBASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 NSUN5P2-203ENST00000457352 1529 ntBASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ATPAF2Q8N5M1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATPAF2Q8N5M1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms