Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 AL596442.2-201ENST00000610240 980 ntBASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SYNPOQ8N3V7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 IGHV3-65-201ENST00000523210 341 ntBASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 MIR4469-201ENST00000583919 79 ntBASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 AC008667.4-201ENST00000607370 168 ntBASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SYNPOQ8N3V7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 ANO7L1-203ENST00000602586 1720 ntBASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
SYNPOQ8N3V7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 METTL21AP1-201ENST00000438852 635 ntBASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 ESPNP-201ENST00000270691 2015 ntBASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 AL390961.4-201ENST00000623958 2535 ntBASIC17.89■□□□□ 0.45
SYNPOQ8N3V7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AC003669.1-201ENST00000334569 611 ntBASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 HCG4B-203ENST00000450128 991 ntBASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 SIGLEC30P-201ENST00000455569 941 ntBASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.88■□□□□ 0.45
SYNPOQ8N3V7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms