Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
LINC01561Q8N1V8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DDT-203ENST00000403754 569 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DDT-206ENST00000430101 573 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 GCSHP5-201ENST00000443090 522 ntBASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AC034232.1-201ENST00000506026 1064 ntBASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 NKILA-202ENST00000614771 2598 ntBASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01561Q8N1V8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AC116353.5-201ENST00000638148 1699 ntBASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 HMGA1P5-201ENST00000412453 271 ntBASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.87□□□□□ -0.51
LINC01561Q8N1V8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms