Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC010331.1-201ENST00000611423 582 ntBASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 PP12613-201ENST00000424958 2230 ntBASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC116Q8IYX3 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 BX276092.7-203ENST00000637198 1536 ntBASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 AC106820.2-201ENST00000563775 3264 ntBASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 MIR1224-201ENST00000408193 85 ntBASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 CHCHD2P8-201ENST00000429873 447 ntBASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 AL445228.2-201ENST00000605589 952 ntBASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCDC116Q8IYX3 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AC096633.1-201ENST00000422446 749 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AL845331.1-201ENST00000424978 1190 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 LINC01451-201ENST00000623792 534 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AL358472.4-201ENST00000633140 710 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 HLA-J-201ENST00000462773 1622 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 AC097374.2-201ENST00000618617 1306 ntBASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CCDC116Q8IYX3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC116Q8IYX3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms