Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AC097488.1-201ENST00000507834 756 ntBASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AC112497.1-201ENST00000624824 639 ntBASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM42Q8IWZ5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 MIR4785-201ENST00000585005 73 ntBASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM42Q8IWZ5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM42Q8IWZ5 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM42Q8IWZ5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRIM42Q8IWZ5 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 DDX43P3-201ENST00000441064 443 ntBASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRIM42Q8IWZ5 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms