Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 BX276092.7-203ENST00000637198 1536 ntBASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SCN4BQ8IWT1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 RPS2P1-201ENST00000434010 821 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 HNRNPDP1-201ENST00000439535 754 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 DDX43P3-201ENST00000441064 443 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 AC093909.1-201ENST00000504731 1122 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 RNA5SP419-201ENST00000515908 135 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 AL049840.3-201ENST00000602669 611 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 AC120114.3-201ENST00000611923 658 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 AD001527.2-201ENST00000622994 785 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 AC073592.5-201ENST00000624854 528 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 KRT18P55-202ENST00000578578 1546 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 PMPCAP1-201ENST00000508114 1576 ntBASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SCN4BQ8IWT1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 AL590627.1-203ENST00000421194 1026 ntBASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.61■□□□□ 0.57
SCN4BQ8IWT1 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCN4BQ8IWT1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms