Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.57■□□□□ 0.4
APLFQ8IW19 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
APLFQ8IW19 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.57■□□□□ 0.4
APLFQ8IW19 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.57■□□□□ 0.4
APLFQ8IW19 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.57■□□□□ 0.4
APLFQ8IW19 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.57■□□□□ 0.4
APLFQ8IW19 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.57■□□□□ 0.4
APLFQ8IW19 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
APLFQ8IW19 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
APLFQ8IW19 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
APLFQ8IW19 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 AL645929.1-201ENST00000420084 975 ntBASIC17.56■□□□□ 0.4
APLFQ8IW19 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 RASA4DP-201ENST00000460726 1199 ntBASIC17.56■□□□□ 0.4
APLFQ8IW19 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.56■□□□□ 0.4
APLFQ8IW19 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
APLFQ8IW19 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.56■□□□□ 0.4
APLFQ8IW19 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.56■□□□□ 0.4
APLFQ8IW19 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
APLFQ8IW19 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
APLFQ8IW19 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.56■□□□□ 0.4
APLFQ8IW19 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APLFQ8IW19 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 PCDHA1-201ENST00000378133 2726 ntBASIC17.55■□□□□ 0.4
APLFQ8IW19 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
APLFQ8IW19 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 TSPY21P-201ENST00000433481 731 ntBASIC17.55■□□□□ 0.4
APLFQ8IW19 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
APLFQ8IW19 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 AC083906.6-201ENST00000641366 219 ntBASIC17.55■□□□□ 0.4
APLFQ8IW19 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.55■□□□□ 0.4
APLFQ8IW19 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APLFQ8IW19 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
APLFQ8IW19 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms