Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC17.82■□□□□ 0.44
PACS2Q86VP3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PACS2Q86VP3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 KRT16P1-201ENST00000399124 1418 ntBASIC17.81■□□□□ 0.44
PACS2Q86VP3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 FAM197Y1-201ENST00000421178 764 ntBASIC17.81■□□□□ 0.44
PACS2Q86VP3 TSPY7P-201ENST00000431358 1114 ntBASIC17.81■□□□□ 0.44
PACS2Q86VP3 AL355355.2-201ENST00000442321 338 ntBASIC17.81■□□□□ 0.44
PACS2Q86VP3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 CR392000.1-201ENST00000624770 1228 ntBASIC17.81■□□□□ 0.44
PACS2Q86VP3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
PACS2Q86VP3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PACS2Q86VP3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 AC079328.2-201ENST00000561241 3354 ntBASIC17.8■□□□□ 0.44
PACS2Q86VP3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PACS2Q86VP3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.8■□□□□ 0.44
PACS2Q86VP3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PACS2Q86VP3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PACS2Q86VP3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms