Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MRPL55Q7Z7F7 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC132938.6-201ENST00000623828 1655 ntBASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 LIN28AP1-201ENST00000429574 405 ntBASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AL157888.1-201ENST00000631930 593 ntBASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
MRPL55Q7Z7F7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
MRPL55Q7Z7F7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MRPL55Q7Z7F7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms