Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
YTHDF3Q7Z739 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 AC092368.3-202ENST00000574180 1591 ntBASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 AC100803.2-201ENST00000562459 1963 ntBASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 AC092171.3-201ENST00000610122 2651 ntBASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 RNF216P1-203ENST00000404404 2427 ntBASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
YTHDF3Q7Z739 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SNORA78-201ENST00000459373 127 ntBASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 KRT8P50-201ENST00000562022 1438 ntBASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
YTHDF3Q7Z739 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
YTHDF3Q7Z739 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
YTHDF3Q7Z739 RN7SL471P-201ENST00000580476 299 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms