Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 AP001094.4-201ENST00000579008 2176 ntBASIC15.46■□□□□ 0.07
C11orf88Q6PI97 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
C11orf88Q6PI97 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
C11orf88Q6PI97 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 AC067930.6-201ENST00000623257 4947 ntBASIC15.45■□□□□ 0.06
C11orf88Q6PI97 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.45■□□□□ 0.06
C11orf88Q6PI97 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 AC092865.7-201ENST00000641832 219 ntBASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
C11orf88Q6PI97 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 MIR1238-201ENST00000408483 83 ntBASIC15.44■□□□□ 0.06
C11orf88Q6PI97 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 C2orf69P3-201ENST00000565542 1120 ntBASIC15.44■□□□□ 0.06
C11orf88Q6PI97 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 HLA-A-209ENST00000638375 975 ntBASIC15.44■□□□□ 0.06
C11orf88Q6PI97 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
C11orf88Q6PI97 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms