Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.97■□□□□ 0.95
CTR9Q6PD62 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC20.97■□□□□ 0.95
CTR9Q6PD62 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.97■□□□□ 0.95
CTR9Q6PD62 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.97■□□□□ 0.95
CTR9Q6PD62 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CTR9Q6PD62 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 HCG11-201ENST00000411553 5696 ntBASIC20.96■□□□□ 0.95
CTR9Q6PD62 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 AL390961.4-201ENST00000623958 2535 ntBASIC20.96■□□□□ 0.95
CTR9Q6PD62 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 AL773604.1-201ENST00000617417 272 ntBASIC20.96■□□□□ 0.95
CTR9Q6PD62 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 AC079776.2-201ENST00000641154 1609 ntBASIC20.96■□□□□ 0.95
CTR9Q6PD62 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CTR9Q6PD62 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CTR9Q6PD62 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC132938.5-201ENST00000624980 1813 ntBASIC20.95■□□□□ 0.94
CTR9Q6PD62 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 AF186996.4-201ENST00000467186 377 ntBASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC064862.7-201ENST00000604520 867 ntBASIC20.95■□□□□ 0.94
CTR9Q6PD62 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC073592.4-201ENST00000623827 446 ntBASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC073592.5-201ENST00000624854 528 ntBASIC20.95■□□□□ 0.94
CTR9Q6PD62 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CTR9Q6PD62 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.95■□□□□ 0.94
CTR9Q6PD62 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 AC109462.3-201ENST00000573934 613 ntBASIC20.94■□□□□ 0.94
CTR9Q6PD62 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 AC004817.3-201ENST00000602957 2129 ntBASIC20.94■□□□□ 0.94
CTR9Q6PD62 AL139288.1-201ENST00000623748 933 ntBASIC20.94■□□□□ 0.94
CTR9Q6PD62 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.94■□□□□ 0.94
CTR9Q6PD62 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CTR9Q6PD62 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CTR9Q6PD62 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.93■□□□□ 0.94
CTR9Q6PD62 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms