Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR3Q6P9H4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 PAWRP1-201ENST00000451083 565 ntBASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 AC112191.1-201ENST00000523689 701 ntBASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 AC109322.1-201ENST00000524499 1264 ntBASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CNKSR3Q6P9H4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 AC006116.8-202ENST00000587620 1550 ntBASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 LINC00628-201ENST00000628516 1289 ntBASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 AC093677.2-201ENST00000600169 1863 ntBASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CNKSR3Q6P9H4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 CROCCP3-202ENST00000420820 1947 ntBASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 AL513480.1-201ENST00000451731 511 ntBASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 AC092919.2-201ENST00000623631 1645 ntBASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CNKSR3Q6P9H4 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 AC092474.2-201ENST00000424288 719 ntBASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 FAM86GP-201ENST00000448322 971 ntBASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 AC239800.4-201ENST00000603712 296 ntBASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 ACTL9-202ENST00000612068 1252 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms