Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.69■□□□□ 0.26
LPCAT4Q643R3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 AC078925.2-201ENST00000624013 1973 ntBASIC16.69■□□□□ 0.26
LPCAT4Q643R3 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LPCAT4Q643R3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 CDCA4P2-201ENST00000441182 718 ntBASIC16.68■□□□□ 0.26
LPCAT4Q643R3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 AC024909.3-201ENST00000611513 2257 ntBASIC16.68■□□□□ 0.26
LPCAT4Q643R3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.68■□□□□ 0.26
LPCAT4Q643R3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.67■□□□□ 0.26
LPCAT4Q643R3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 MCCD1P1-208ENST00000445732 328 ntBASIC16.67■□□□□ 0.26
LPCAT4Q643R3 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 CKBP1-201ENST00000565489 1086 ntBASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AC046185.3-201ENST00000623228 1824 ntBASIC16.67■□□□□ 0.26
LPCAT4Q643R3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 AL024508.2-201ENST00000607749 1894 ntBASIC16.67■□□□□ 0.26
LPCAT4Q643R3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LPCAT4Q643R3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 GPAT2P1-201ENST00000444924 1672 ntBASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.66■□□□□ 0.26
LPCAT4Q643R3 AC097658.1-201ENST00000475555 843 ntBASIC16.66■□□□□ 0.26
LPCAT4Q643R3 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms