Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 DGCR5-201ENST00000399539 862 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 AL158211.3-201ENST00000607385 239 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 KRT8P23-201ENST00000560090 1207 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 AC132938.2-201ENST00000579188 680 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 AC068587.10-201ENST00000641210 219 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 AL591163.1-201ENST00000641757 987 ntBASIC15.17■□□□□ 0.02
LRRK2Q5S007 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRK2Q5S007 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRK2Q5S007 AC097637.2-201ENST00000624096 1997 ntBASIC15.16■□□□□ 0.02
LRRK2Q5S007 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 AC069120.2-201ENST00000524091 540 ntBASIC15.16■□□□□ 0.02
LRRK2Q5S007 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 ESPNP-201ENST00000270691 2015 ntBASIC15.16■□□□□ 0.02
LRRK2Q5S007 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LRRK2Q5S007 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.16■□□□□ 0.02
LRRK2Q5S007 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 ELK2AP-201ENST00000392510 1007 ntBASIC15.15■□□□□ 0.02
LRRK2Q5S007 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 DFFBP1-201ENST00000433250 979 ntBASIC15.15■□□□□ 0.02
LRRK2Q5S007 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AC026120.1-201ENST00000611536 926 ntBASIC15.15■□□□□ 0.02
LRRK2Q5S007 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 FLYWCH1P1-201ENST00000460917 1874 ntBASIC15.15■□□□□ 0.02
LRRK2Q5S007 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC15.15■□□□□ 0.02
LRRK2Q5S007 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LRRK2Q5S007 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms