Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 AC012640.2-201ENST00000561606 901 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 AC139887.3-201ENST00000568585 713 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.27■□□□□ 0.84
USH1GQ495M9 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 AC116407.3-201ENST00000623905 1129 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
USH1GQ495M9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.27■□□□□ 0.84
USH1GQ495M9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
USH1GQ495M9 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
USH1GQ495M9 AC132938.5-201ENST00000624980 1813 ntBASIC20.27■□□□□ 0.84
USH1GQ495M9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
USH1GQ495M9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
USH1GQ495M9 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.27■□□□□ 0.83
USH1GQ495M9 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
USH1GQ495M9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.26■□□□□ 0.83
USH1GQ495M9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 RPS2P28-201ENST00000314255 741 ntBASIC20.26■□□□□ 0.83
USH1GQ495M9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 SPDYE21P-201ENST00000413323 827 ntBASIC20.26■□□□□ 0.83
USH1GQ495M9 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
USH1GQ495M9 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC20.26■□□□□ 0.83
USH1GQ495M9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 AF228730.7-201ENST00000641842 219 ntBASIC20.26■□□□□ 0.83
USH1GQ495M9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USH1GQ495M9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
USH1GQ495M9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USH1GQ495M9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AC148477.5-201ENST00000625164 1645 ntBASIC20.25■□□□□ 0.83
USH1GQ495M9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.25■□□□□ 0.83
USH1GQ495M9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.25■□□□□ 0.83
USH1GQ495M9 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.25■□□□□ 0.83
USH1GQ495M9 FUT8-AS1-201ENST00000621019 1521 ntBASIC20.25■□□□□ 0.83
USH1GQ495M9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.25■□□□□ 0.83
USH1GQ495M9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USH1GQ495M9 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.25■□□□□ 0.83
USH1GQ495M9 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.24■□□□□ 0.83
USH1GQ495M9 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 KLF4P1-201ENST00000412782 1185 ntBASIC20.24■□□□□ 0.83
USH1GQ495M9 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 AC092910.1-201ENST00000482027 1129 ntBASIC20.24■□□□□ 0.83
USH1GQ495M9 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.24■□□□□ 0.83
USH1GQ495M9 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.24■□□□□ 0.83
USH1GQ495M9 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USH1GQ495M9 AC073592.4-201ENST00000623827 446 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms