Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 AC010331.1-201ENST00000611423 582 ntBASIC17.05■□□□□ 0.32
PCDH1Q08174 AC124864.1-201ENST00000623408 392 ntBASIC17.05■□□□□ 0.32
PCDH1Q08174 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 PP12613-201ENST00000424958 2230 ntBASIC17.05■□□□□ 0.32
PCDH1Q08174 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH1Q08174 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH1Q08174 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH1Q08174 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH1Q08174 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 AC016734.2-201ENST00000624325 1377 ntBASIC17.04■□□□□ 0.32
PCDH1Q08174 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 AC005336.2-201ENST00000593183 939 ntBASIC17.04■□□□□ 0.32
PCDH1Q08174 AL121672.3-201ENST00000608644 468 ntBASIC17.04■□□□□ 0.32
PCDH1Q08174 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PCDH1Q08174 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.04■□□□□ 0.32
PCDH1Q08174 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
PCDH1Q08174 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH1Q08174 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH1Q08174 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH1Q08174 CHCHD2P8-201ENST00000429873 447 ntBASIC17.03■□□□□ 0.32
PCDH1Q08174 AC007967.3-201ENST00000434308 558 ntBASIC17.03■□□□□ 0.32
PCDH1Q08174 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.03■□□□□ 0.32
PCDH1Q08174 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 IGHV3-41-201ENST00000613121 348 ntBASIC17.03■□□□□ 0.32
PCDH1Q08174 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.03■□□□□ 0.32
PCDH1Q08174 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 AC016396.2-201ENST00000562575 1417 ntBASIC17.03■□□□□ 0.32
PCDH1Q08174 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.03■□□□□ 0.32
PCDH1Q08174 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
PCDH1Q08174 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH1Q08174 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PCDH1Q08174 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms