Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.63■□□□□ 0.25
TUBA4AP68366 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TUBA4AP68366 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.63■□□□□ 0.25
TUBA4AP68366 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 PCDHB17P-201ENST00000539533 2393 ntBASIC16.63■□□□□ 0.25
TUBA4AP68366 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TUBA4AP68366 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 LINC02199-201ENST00000506655 2702 ntBASIC16.62■□□□□ 0.25
TUBA4AP68366 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA4AP68366 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 INGX-201ENST00000359239 846 ntBASIC16.62■□□□□ 0.25
TUBA4AP68366 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 C2orf69P3-201ENST00000565542 1120 ntBASIC16.62■□□□□ 0.25
TUBA4AP68366 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA4AP68366 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TUBA4AP68366 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TUBA4AP68366 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
TUBA4AP68366 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TUBA4AP68366 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.61■□□□□ 0.25
TUBA4AP68366 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.61■□□□□ 0.25
TUBA4AP68366 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 LINC01568-207ENST00000641790 1380 ntBASIC16.61■□□□□ 0.25
TUBA4AP68366 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TUBA4AP68366 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TUBA4AP68366 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBA4AP68366 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TUBA4AP68366 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.6■□□□□ 0.25
TUBA4AP68366 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TUBA4AP68366 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.6■□□□□ 0.25
TUBA4AP68366 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TUBA4AP68366 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TUBA4AP68366 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TUBA4AP68366 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms