Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
CLTCL1P53675 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC25.06■■□□□ 1.6
CLTCL1P53675 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC25.06■■□□□ 1.6
CLTCL1P53675 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CLTCL1P53675 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CLTCL1P53675 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
CLTCL1P53675 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC25.05■■□□□ 1.6
CLTCL1P53675 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.05■■□□□ 1.6
CLTCL1P53675 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC25.05■■□□□ 1.6
CLTCL1P53675 CXCL1P1-201ENST00000502804 216 ntBASIC25.05■■□□□ 1.6
CLTCL1P53675 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC25.05■■□□□ 1.6
CLTCL1P53675 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC25.05■■□□□ 1.6
CLTCL1P53675 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC25.05■■□□□ 1.6
CLTCL1P53675 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
CLTCL1P53675 AC006116.8-202ENST00000587620 1550 ntBASIC25.05■■□□□ 1.6
CLTCL1P53675 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CLTCL1P53675 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
CLTCL1P53675 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC25.05■■□□□ 1.6
CLTCL1P53675 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
CLTCL1P53675 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CLTCL1P53675 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CLTCL1P53675 NABP1-203ENST00000409510 843 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC25.04■■□□□ 1.6
CLTCL1P53675 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CLTCL1P53675 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CLTCL1P53675 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CLTCL1P53675 AC025580.3-201ENST00000617932 1424 ntBASIC25.04■■□□□ 1.6
CLTCL1P53675 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC25.04■■□□□ 1.6
CLTCL1P53675 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 CEND1P1-201ENST00000451006 455 ntBASIC25.04■■□□□ 1.6
CLTCL1P53675 SMN2-210ENST00000511812 867 ntTSL 2 BASIC25.04■■□□□ 1.6
CLTCL1P53675 RPS15-207ENST00000591032 550 ntTSL 3 BASIC25.04■■□□□ 1.6
CLTCL1P53675 MED16-214ENST00000617672 554 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 KRT18P28-201ENST00000453838 1332 ntBASIC25.04■■□□□ 1.6
CLTCL1P53675 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC25.04■■□□□ 1.6
CLTCL1P53675 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CLTCL1P53675 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC25.04■■□□□ 1.6
CLTCL1P53675 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC25.04■■□□□ 1.6
CLTCL1P53675 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
CLTCL1P53675 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC25.03■■□□□ 1.6
CLTCL1P53675 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC25.03■■□□□ 1.6
CLTCL1P53675 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.03■■□□□ 1.6
CLTCL1P53675 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC25.03■■□□□ 1.6
CLTCL1P53675 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 TSEN15P1-201ENST00000423257 515 ntBASIC25.03■■□□□ 1.6
CLTCL1P53675 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC25.03■■□□□ 1.6
CLTCL1P53675 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC25.03■■□□□ 1.6
CLTCL1P53675 AC099522.2-201ENST00000607001 744 ntBASIC25.03■■□□□ 1.6
CLTCL1P53675 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC25.03■■□□□ 1.6
CLTCL1P53675 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CLTCL1P53675 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
CLTCL1P53675 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CLTCL1P53675 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
CLTCL1P53675 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC25.02■■□□□ 1.6
CLTCL1P53675 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms