Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 AL391807.1-203ENST00000604392 2365 ntBASIC16.59■□□□□ 0.25
SMSP52788 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 AC006116.8-202ENST00000587620 1550 ntBASIC16.59■□□□□ 0.25
SMSP52788 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SMSP52788 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMSP52788 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.58■□□□□ 0.25
SMSP52788 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.58■□□□□ 0.25
SMSP52788 AL645608.8-201ENST00000606034 2086 ntBASIC16.58■□□□□ 0.25
SMSP52788 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.58■□□□□ 0.25
SMSP52788 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SMSP52788 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMSP52788 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.58■□□□□ 0.25
SMSP52788 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SMSP52788 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.58■□□□□ 0.24
SMSP52788 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.58■□□□□ 0.24
SMSP52788 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.58■□□□□ 0.24
SMSP52788 AC012615.1-201ENST00000565797 1299 ntBASIC16.58■□□□□ 0.24
SMSP52788 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SMSP52788 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.58■□□□□ 0.24
SMSP52788 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.58■□□□□ 0.24
SMSP52788 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
SMSP52788 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.58■□□□□ 0.24
SMSP52788 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SMSP52788 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SMSP52788 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.58■□□□□ 0.24
SMSP52788 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SMSP52788 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SMSP52788 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.57■□□□□ 0.24
SMSP52788 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 AC009102.3-201ENST00000623118 1491 ntBASIC16.57■□□□□ 0.24
SMSP52788 KRT8P7-201ENST00000533003 1432 ntBASIC16.57■□□□□ 0.24
SMSP52788 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMSP52788 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SMSP52788 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.57■□□□□ 0.24
SMSP52788 AC079602.3-201ENST00000623931 403 ntBASIC16.57■□□□□ 0.24
SMSP52788 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
SMSP52788 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
SMSP52788 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SMSP52788 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SMSP52788 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SMSP52788 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
SMSP52788 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.56■□□□□ 0.24
SMSP52788 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.56■□□□□ 0.24
SMSP52788 KRT18P55-202ENST00000578578 1546 ntBASIC16.56■□□□□ 0.24
SMSP52788 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.56■□□□□ 0.24
SMSP52788 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.56■□□□□ 0.24
SMSP52788 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SMSP52788 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SMSP52788 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.56■□□□□ 0.24
SMSP52788 AC104819.1-201ENST00000504587 486 ntBASIC16.56■□□□□ 0.24
SMSP52788 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.56■□□□□ 0.24
SMSP52788 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms