Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 PCED1CP-201ENST00000419887 785 ntBASIC17.15■□□□□ 0.34
CLCN2P51788 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 AL358472.4-201ENST00000633140 710 ntBASIC17.15■□□□□ 0.34
CLCN2P51788 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.15■□□□□ 0.34
CLCN2P51788 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.15■□□□□ 0.34
CLCN2P51788 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CLCN2P51788 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLCN2P51788 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLCN2P51788 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CLCN2P51788 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.14■□□□□ 0.33
CLCN2P51788 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CLCN2P51788 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN2P51788 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CLCN2P51788 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
CLCN2P51788 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN2P51788 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN2P51788 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.14■□□□□ 0.33
CLCN2P51788 AP000550.4-202ENST00000639755 178 ntBASIC17.14■□□□□ 0.33
CLCN2P51788 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLCN2P51788 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CLCN2P51788 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 AC005332.1-201ENST00000577698 1310 ntBASIC17.14■□□□□ 0.33
CLCN2P51788 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.14■□□□□ 0.33
CLCN2P51788 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CLCN2P51788 AL391807.1-203ENST00000604392 2365 ntBASIC17.14■□□□□ 0.33
CLCN2P51788 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLCN2P51788 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN2P51788 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CLCN2P51788 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CLCN2P51788 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN2P51788 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 PVRIG2P-201ENST00000435460 978 ntBASIC17.13■□□□□ 0.33
CLCN2P51788 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN2P51788 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.13■□□□□ 0.33
CLCN2P51788 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 AC079602.3-201ENST00000623931 403 ntBASIC17.13■□□□□ 0.33
CLCN2P51788 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.13■□□□□ 0.33
CLCN2P51788 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CLCN2P51788 IER3-202ENST00000376377 1350 ntBASIC17.13■□□□□ 0.33
CLCN2P51788 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CLCN2P51788 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms