Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.66■□□□□ 0.9
CDK8P49336 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 AC034105.1-201ENST00000563488 319 ntBASIC20.66■□□□□ 0.9
CDK8P49336 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK8P49336 AL356488.2-201ENST00000602755 427 ntBASIC20.66■□□□□ 0.9
CDK8P49336 AC004706.3-202ENST00000621574 984 ntBASIC20.66■□□□□ 0.9
CDK8P49336 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.66■□□□□ 0.9
CDK8P49336 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 ZNF259P1-201ENST00000407656 1365 ntBASIC20.66■□□□□ 0.9
CDK8P49336 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDK8P49336 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.66■□□□□ 0.9
CDK8P49336 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK8P49336 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK8P49336 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 MYCLP1-201ENST00000372451 1075 ntBASIC20.65■□□□□ 0.9
CDK8P49336 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.65■□□□□ 0.9
CDK8P49336 KRT18P58-201ENST00000527480 1120 ntBASIC20.65■□□□□ 0.9
CDK8P49336 UNC93B6-202ENST00000528242 690 ntBASIC20.65■□□□□ 0.9
CDK8P49336 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.65■□□□□ 0.9
CDK8P49336 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
CDK8P49336 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDK8P49336 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDK8P49336 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
CDK8P49336 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK8P49336 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.64■□□□□ 0.9
CDK8P49336 NEFHP1-201ENST00000412845 2629 ntBASIC20.64■□□□□ 0.9
CDK8P49336 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC20.64■□□□□ 0.9
CDK8P49336 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.64■□□□□ 0.9
CDK8P49336 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CDK8P49336 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDK8P49336 AC020763.4-201ENST00000623414 4170 ntBASIC20.64■□□□□ 0.89
CDK8P49336 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.64■□□□□ 0.89
CDK8P49336 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK8P49336 POLD2P1-201ENST00000511220 997 ntBASIC20.64■□□□□ 0.89
CDK8P49336 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.64■□□□□ 0.89
CDK8P49336 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK8P49336 Z83851.2-201ENST00000609564 659 ntBASIC20.64■□□□□ 0.89
CDK8P49336 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CDK8P49336 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK8P49336 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDK8P49336 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
CDK8P49336 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.64■□□□□ 0.89
CDK8P49336 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 AC006116.8-202ENST00000587620 1550 ntBASIC20.63■□□□□ 0.89
CDK8P49336 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 NCF1C-201ENST00000438382 1427 ntBASIC20.63■□□□□ 0.89
CDK8P49336 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CDK8P49336 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.63■□□□□ 0.89
CDK8P49336 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDK8P49336 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms