Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
COL15A1P39059 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
COL15A1P39059 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.27■■□□□ 1.16
COL15A1P39059 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL15A1P39059 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL15A1P39059 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.27■■□□□ 1.16
COL15A1P39059 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL15A1P39059 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.27■■□□□ 1.16
COL15A1P39059 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
COL15A1P39059 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC22.27■■□□□ 1.15
COL15A1P39059 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC22.26■■□□□ 1.15
COL15A1P39059 ATP6V0CP3-201ENST00000417255 467 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.26■■□□□ 1.15
COL15A1P39059 STK19B-204ENST00000512515 211 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
COL15A1P39059 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 KRT19P2-202ENST00000557173 1012 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 OR7E47P-204ENST00000575924 449 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 AP002472.1-201ENST00000577490 586 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC22.26■■□□□ 1.15
COL15A1P39059 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
COL15A1P39059 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 PC-214ENST00000628663 1470 ntTSL 5 BASIC22.26■■□□□ 1.15
COL15A1P39059 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.26■■□□□ 1.15
COL15A1P39059 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
COL15A1P39059 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 KRT18P55-202ENST00000578578 1546 ntBASIC22.26■■□□□ 1.15
COL15A1P39059 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC22.26■■□□□ 1.15
COL15A1P39059 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC22.25■■□□□ 1.15
COL15A1P39059 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.25■■□□□ 1.15
COL15A1P39059 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 AC004877.2-201ENST00000623941 599 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 ORC5-208ENST00000626700 344 ntTSL 3 BASIC22.25■■□□□ 1.15
COL15A1P39059 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
COL15A1P39059 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
COL15A1P39059 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 AC009336.1-201ENST00000608941 1553 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC22.25■■□□□ 1.15
COL15A1P39059 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.25■■□□□ 1.15
COL15A1P39059 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC22.25■■□□□ 1.15
COL15A1P39059 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC22.25■■□□□ 1.15
COL15A1P39059 AP002414.1-201ENST00000391405 1147 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 PTCHD3P3-201ENST00000403073 906 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 DDX43P3-201ENST00000441064 443 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.25■■□□□ 1.15
COL15A1P39059 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC22.25■■□□□ 1.15
COL15A1P39059 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC22.25■■□□□ 1.15
COL15A1P39059 AL353135.1-201ENST00000606729 504 ntBASIC22.25■■□□□ 1.15
COL15A1P39059 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC22.25■■□□□ 1.15
COL15A1P39059 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL15A1P39059 BCAR1-209ENST00000546196 1340 ntBASIC22.24■■□□□ 1.15
COL15A1P39059 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
COL15A1P39059 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL15A1P39059 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC22.24■■□□□ 1.15
COL15A1P39059 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms