Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 HLA-J-203ENST00000494367 1087 ntBASIC22.38■■□□□ 1.17
ATP6V1AP38606 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 LSM12-202ENST00000585388 942 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 AC068137.2-201ENST00000605408 478 ntBASIC22.38■■□□□ 1.17
ATP6V1AP38606 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC22.38■■□□□ 1.17
ATP6V1AP38606 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP6V1AP38606 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 COX20P2-201ENST00000452636 358 ntBASIC22.37■■□□□ 1.17
ATP6V1AP38606 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 DAD1-205ENST00000543337 501 ntTSL 3 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 MED16-214ENST00000617672 554 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP6V1AP38606 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP6V1AP38606 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.36■■□□□ 1.17
ATP6V1AP38606 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
ATP6V1AP38606 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.36■■□□□ 1.17
ATP6V1AP38606 DDX43P3-201ENST00000441064 443 ntBASIC22.36■■□□□ 1.17
ATP6V1AP38606 AC109322.1-201ENST00000524499 1264 ntBASIC22.36■■□□□ 1.17
ATP6V1AP38606 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC22.36■■□□□ 1.17
ATP6V1AP38606 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP6V1AP38606 REXO1L3P-201ENST00000622202 1288 ntBASIC22.36■■□□□ 1.17
ATP6V1AP38606 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP6V1AP38606 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 CROCCP3-202ENST00000420820 1947 ntBASIC22.35■■□□□ 1.17
ATP6V1AP38606 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 AC022145.2-201ENST00000598203 171 ntBASIC22.35■■□□□ 1.17
ATP6V1AP38606 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ATP6V1AP38606 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
ATP6V1AP38606 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V1AP38606 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V1AP38606 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V1AP38606 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ATP6V1AP38606 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 CBR1-202ENST00000399191 838 ntTSL 3 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP6V1AP38606 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms