Protein–RNA interactions for Protein: P33991

MCM4, DNA replication licensing factor MCM4, humanhuman

Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4P33991 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.85■□□□□ 0.93
MCM4P33991 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
MCM4P33991 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
MCM4P33991 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.84■□□□□ 0.93
MCM4P33991 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
MCM4P33991 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.84■□□□□ 0.93
MCM4P33991 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.84■□□□□ 0.93
MCM4P33991 FITM1-202ENST00000559294 800 ntBASIC20.84■□□□□ 0.93
MCM4P33991 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.84■□□□□ 0.93
MCM4P33991 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.84■□□□□ 0.93
MCM4P33991 LINC01451-201ENST00000623792 534 ntBASIC20.84■□□□□ 0.93
MCM4P33991 AC097493.4-201ENST00000641197 219 ntBASIC20.84■□□□□ 0.93
MCM4P33991 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
MCM4P33991 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
MCM4P33991 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
MCM4P33991 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC20.83■□□□□ 0.93
MCM4P33991 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.83■□□□□ 0.93
MCM4P33991 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.83■□□□□ 0.93
MCM4P33991 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.83■□□□□ 0.93
MCM4P33991 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
MCM4P33991 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.83■□□□□ 0.93
MCM4P33991 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.83■□□□□ 0.93
MCM4P33991 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
MCM4P33991 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MCM4P33991 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.83■□□□□ 0.92
MCM4P33991 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MCM4P33991 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.83■□□□□ 0.92
MCM4P33991 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.83■□□□□ 0.92
MCM4P33991 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MCM4P33991 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
MCM4P33991 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.82■□□□□ 0.92
MCM4P33991 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.82■□□□□ 0.92
MCM4P33991 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.82■□□□□ 0.92
MCM4P33991 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.82■□□□□ 0.92
MCM4P33991 AC012306.2-201ENST00000609350 630 ntBASIC20.82■□□□□ 0.92
MCM4P33991 DGCR10-201ENST00000609839 495 ntBASIC20.82■□□□□ 0.92
MCM4P33991 AC011298.2-201ENST00000617989 482 ntBASIC20.82■□□□□ 0.92
MCM4P33991 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
MCM4P33991 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.82■□□□□ 0.92
MCM4P33991 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC20.82■□□□□ 0.92
MCM4P33991 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
MCM4P33991 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.81■□□□□ 0.92
MCM4P33991 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.81■□□□□ 0.92
MCM4P33991 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.81■□□□□ 0.92
MCM4P33991 AC116353.5-201ENST00000638148 1699 ntBASIC20.81■□□□□ 0.92
MCM4P33991 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.81■□□□□ 0.92
MCM4P33991 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
MCM4P33991 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 NAPSB-206ENST00000562112 1266 ntBASIC20.81■□□□□ 0.92
MCM4P33991 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MCM4P33991 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms