Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.86■□□□□ 0.45
HLA-DPA1P20036 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 AC010460.3-201ENST00000511359 1579 ntBASIC17.85■□□□□ 0.45
HLA-DPA1P20036 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 AC233702.3-201ENST00000578656 1387 ntBASIC17.85■□□□□ 0.45
HLA-DPA1P20036 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 Z69720.1-201ENST00000601483 472 ntBASIC17.85■□□□□ 0.45
HLA-DPA1P20036 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HLA-DPA1P20036 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 AC007967.3-201ENST00000434308 558 ntBASIC17.84■□□□□ 0.45
HLA-DPA1P20036 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HLA-DPA1P20036 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HLA-DPA1P20036 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 UPK3BP1-201ENST00000428678 509 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 ATP5G2P1-201ENST00000433580 426 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 TOB2P1-201ENST00000469761 992 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 AC009533.2-201ENST00000543664 586 ntBASIC17.83■□□□□ 0.44
HLA-DPA1P20036 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DPA1P20036 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms