Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CSB-PGBD3P0DP91 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 AC009336.1-201ENST00000608941 1553 ntBASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 AC100803.2-201ENST00000562459 1963 ntBASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CSB-PGBD3P0DP91 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PI4KAP1-204ENST00000612579 1703 ntBASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 STOM-202ENST00000347359 870 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 AC004835.2-201ENST00000603762 682 ntBASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 CITED2-204ENST00000618718 901 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 BX276092.7-203ENST00000637198 1536 ntBASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 AC138932.1-201ENST00000534164 6830 ntBASIC23.28■■□□□ 1.32
CSB-PGBD3P0DP91 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC009949.1-201ENST00000623048 1830 ntBASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC073592.3-201ENST00000625118 1834 ntBASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 RNF34-208ENST00000555076 593 ntTSL 3 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 SPCS2P1-201ENST00000561636 679 ntBASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC093512.1-201ENST00000617969 520 ntBASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 BCL2-203ENST00000589955 5011 ntBASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC23.27■■□□□ 1.32
CSB-PGBD3P0DP91 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.27■■□□□ 1.31
CSB-PGBD3P0DP91 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AL035633.1-201ENST00000406139 838 ntBASIC23.26■■□□□ 1.31
CSB-PGBD3P0DP91 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms