Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXC6P09630 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 AC074386.1-202ENST00000463561 864 ntBASIC19.85■□□□□ 0.77
HOXC6P09630 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.85■□□□□ 0.77
HOXC6P09630 CITED2-204ENST00000618718 901 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 BX276092.7-203ENST00000637198 1536 ntBASIC19.85■□□□□ 0.77
HOXC6P09630 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HOXC6P09630 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.85■□□□□ 0.77
HOXC6P09630 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.85■□□□□ 0.77
HOXC6P09630 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC6P09630 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC6P09630 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC6P09630 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
HOXC6P09630 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 FAM8A3P-201ENST00000427218 844 ntBASIC19.84■□□□□ 0.77
HOXC6P09630 DDX43P3-201ENST00000441064 443 ntBASIC19.84■□□□□ 0.77
HOXC6P09630 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC6P09630 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC6P09630 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC6P09630 AC116407.2-201ENST00000613639 860 ntBASIC19.84■□□□□ 0.77
HOXC6P09630 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HOXC6P09630 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.84■□□□□ 0.77
HOXC6P09630 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.84■□□□□ 0.77
HOXC6P09630 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC6P09630 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.84■□□□□ 0.77
HOXC6P09630 AC097637.2-201ENST00000624096 1997 ntBASIC19.84■□□□□ 0.77
HOXC6P09630 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
HOXC6P09630 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HOXC6P09630 AC025580.3-201ENST00000617932 1424 ntBASIC19.84■□□□□ 0.77
HOXC6P09630 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC6P09630 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC6P09630 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.83■□□□□ 0.77
HOXC6P09630 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
HOXC6P09630 MIR770-201ENST00000390219 98 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 LINC00982-205ENST00000420957 435 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 FAM58CP-201ENST00000435741 640 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.83■□□□□ 0.77
HOXC6P09630 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.83■□□□□ 0.77
HOXC6P09630 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
HOXC6P09630 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.83■□□□□ 0.77
HOXC6P09630 AC092364.2-202ENST00000597012 1073 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 AL513210.1-201ENST00000629608 234 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 AC007064.4-201ENST00000637740 555 ntBASIC19.83■□□□□ 0.77
HOXC6P09630 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC6P09630 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC6P09630 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.83■□□□□ 0.76
HOXC6P09630 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXC6P09630 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC6P09630 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC6P09630 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HOXC6P09630 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXC6P09630 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
HOXC6P09630 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.83■□□□□ 0.76
HOXC6P09630 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.83■□□□□ 0.76
HOXC6P09630 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
HOXC6P09630 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.82■□□□□ 0.76
HOXC6P09630 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 TSEN15P1-201ENST00000423257 515 ntBASIC19.82■□□□□ 0.76
HOXC6P09630 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HOXC6P09630 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
HOXC6P09630 IGHV3-52-201ENST00000519770 353 ntBASIC19.82■□□□□ 0.76
HOXC6P09630 AC023141.13-201ENST00000604991 943 ntBASIC19.82■□□□□ 0.76
HOXC6P09630 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms