Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR3DP05423 AC073648.2-201ENST00000510116 352 ntBASIC21.12■□□□□ 0.97
POLR3DP05423 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
POLR3DP05423 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC21.12■□□□□ 0.97
POLR3DP05423 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
POLR3DP05423 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC21.12■□□□□ 0.97
POLR3DP05423 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 PCDHB18P-201ENST00000524813 2368 ntBASIC21.11■□□□□ 0.97
POLR3DP05423 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR3DP05423 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR3DP05423 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.11■□□□□ 0.97
POLR3DP05423 AP000347.1-202ENST00000435868 847 ntBASIC21.11■□□□□ 0.97
POLR3DP05423 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR3DP05423 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR3DP05423 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR3DP05423 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
POLR3DP05423 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC21.11■□□□□ 0.97
POLR3DP05423 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.11■□□□□ 0.97
POLR3DP05423 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
POLR3DP05423 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
POLR3DP05423 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.1■□□□□ 0.97
POLR3DP05423 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
POLR3DP05423 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
POLR3DP05423 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
POLR3DP05423 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR3DP05423 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR3DP05423 AL031284.1-201ENST00000419297 478 ntBASIC21.1■□□□□ 0.97
POLR3DP05423 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC21.1■□□□□ 0.97
POLR3DP05423 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC21.1■□□□□ 0.97
POLR3DP05423 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.1■□□□□ 0.97
POLR3DP05423 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
POLR3DP05423 FZD10-202ENST00000539839 3282 ntBASIC21.1■□□□□ 0.97
POLR3DP05423 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
POLR3DP05423 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.09■□□□□ 0.97
POLR3DP05423 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 AC100803.2-201ENST00000562459 1963 ntBASIC21.09■□□□□ 0.97
POLR3DP05423 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.09■□□□□ 0.97
POLR3DP05423 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.09■□□□□ 0.97
POLR3DP05423 AC122714.2-201ENST00000502787 707 ntBASIC21.09■□□□□ 0.97
POLR3DP05423 RNA5SP419-201ENST00000515908 135 ntBASIC21.09■□□□□ 0.97
POLR3DP05423 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
POLR3DP05423 SART3-203ENST00000546611 1184 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms