Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGN1P05114 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
HMGN1P05114 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
HMGN1P05114 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
HMGN1P05114 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
HMGN1P05114 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGN1P05114 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
HMGN1P05114 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGN1P05114 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 AP000523.1-201ENST00000398242 1049 ntBASIC16.03■□□□□ 0.16
HMGN1P05114 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
HMGN1P05114 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.03■□□□□ 0.16
HMGN1P05114 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.03■□□□□ 0.16
HMGN1P05114 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.03■□□□□ 0.16
HMGN1P05114 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
HMGN1P05114 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HMGN1P05114 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGN1P05114 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGN1P05114 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.02■□□□□ 0.16
HMGN1P05114 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGN1P05114 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
HMGN1P05114 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
HMGN1P05114 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
HMGN1P05114 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGN1P05114 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.02■□□□□ 0.16
HMGN1P05114 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
HMGN1P05114 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.02■□□□□ 0.16
HMGN1P05114 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
HMGN1P05114 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.02■□□□□ 0.15
HMGN1P05114 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HMGN1P05114 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGN1P05114 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
HMGN1P05114 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGN1P05114 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.02■□□□□ 0.15
HMGN1P05114 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGN1P05114 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
HMGN1P05114 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
HMGN1P05114 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGN1P05114 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGN1P05114 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGN1P05114 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGN1P05114 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGN1P05114 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGN1P05114 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
HMGN1P05114 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.01■□□□□ 0.15
HMGN1P05114 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGN1P05114 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms