Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
APOC1P02654 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.67■□□□□ 0.1
APOC1P02654 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 KRT18P48-201ENST00000434763 852 ntBASIC15.67■□□□□ 0.1
APOC1P02654 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 AL136038.4-201ENST00000603606 1261 ntBASIC15.67■□□□□ 0.1
APOC1P02654 AL023973.1-201ENST00000624619 620 ntBASIC15.67■□□□□ 0.1
APOC1P02654 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 LINC00602-201ENST00000629776 2065 ntBASIC15.67■□□□□ 0.1
APOC1P02654 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.67■□□□□ 0.1
APOC1P02654 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.67■□□□□ 0.1
APOC1P02654 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
APOC1P02654 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
APOC1P02654 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.66■□□□□ 0.1
APOC1P02654 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.66■□□□□ 0.1
APOC1P02654 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 STARP1-201ENST00000397973 869 ntBASIC15.66■□□□□ 0.1
APOC1P02654 AC113347.1-201ENST00000413321 391 ntBASIC15.66■□□□□ 0.1
APOC1P02654 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC15.66■□□□□ 0.1
APOC1P02654 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 AC133561.5-201ENST00000635547 218 ntBASIC15.66■□□□□ 0.1
APOC1P02654 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.66■□□□□ 0.1
APOC1P02654 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
APOC1P02654 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.66■□□□□ 0.1
APOC1P02654 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
APOC1P02654 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
APOC1P02654 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.66■□□□□ 0.1
APOC1P02654 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.65■□□□□ 0.1
APOC1P02654 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
APOC1P02654 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 AL391807.1-203ENST00000604392 2365 ntBASIC15.65■□□□□ 0.1
APOC1P02654 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 USF2-205ENST00000594064 1179 ntTSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 AC097493.4-201ENST00000641197 219 ntBASIC15.65■□□□□ 0.1
APOC1P02654 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
APOC1P02654 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
APOC1P02654 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.65■□□□□ 0.1
APOC1P02654 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
APOC1P02654 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
APOC1P02654 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
APOC1P02654 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
APOC1P02654 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
APOC1P02654 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms