Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SIRPAP1-201ENST00000448467 1770 ntBASIC13.67□□□□□ -0.22
TRBV12-3P01733 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.67□□□□□ -0.22
TRBV12-3P01733 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TRBV12-3P01733 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AC009533.2-201ENST00000543664 586 ntBASIC13.66□□□□□ -0.22
TRBV12-3P01733 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 AL732292.2-201ENST00000609649 430 ntBASIC13.66□□□□□ -0.22
TRBV12-3P01733 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 EML3-217ENST00000531557 2509 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TRBV12-3P01733 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC13.66□□□□□ -0.22
TRBV12-3P01733 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 BX276092.7-203ENST00000637198 1536 ntBASIC13.65□□□□□ -0.22
TRBV12-3P01733 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 AC011467.2-201ENST00000598425 242 ntBASIC13.65□□□□□ -0.22
TRBV12-3P01733 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 AC114341.1-201ENST00000618070 349 ntBASIC13.65□□□□□ -0.22
TRBV12-3P01733 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TRBV12-3P01733 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TRBV12-3P01733 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
TRBV12-3P01733 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms