Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
RAPGEF3O95398 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RAPGEF3O95398 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
RAPGEF3O95398 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.25■■□□□ 1.79
RAPGEF3O95398 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 PPP6R2P1-201ENST00000450880 1275 ntBASIC26.24■■□□□ 1.79
RAPGEF3O95398 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC26.24■■□□□ 1.79
RAPGEF3O95398 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
RAPGEF3O95398 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 AC004890.2-204ENST00000481968 304 ntBASIC26.23■■□□□ 1.79
RAPGEF3O95398 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC26.23■■□□□ 1.79
RAPGEF3O95398 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
RAPGEF3O95398 AFG3L1P-217ENST00000557444 2447 ntBASIC26.23■■□□□ 1.79
RAPGEF3O95398 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 U91328.1-201ENST00000437528 223 ntBASIC26.22■■□□□ 1.79
RAPGEF3O95398 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
RAPGEF3O95398 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC26.22■■□□□ 1.79
RAPGEF3O95398 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
RAPGEF3O95398 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 PIN1P1-201ENST00000412108 996 ntBASIC26.21■■□□□ 1.79
RAPGEF3O95398 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC26.21■■□□□ 1.79
RAPGEF3O95398 IGHV3-52-201ENST00000519770 353 ntBASIC26.21■■□□□ 1.79
RAPGEF3O95398 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC26.21■■□□□ 1.79
RAPGEF3O95398 RARRES2P8-201ENST00000566335 367 ntBASIC26.21■■□□□ 1.79
RAPGEF3O95398 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 GNAS-203ENST00000306120 1878 ntBASIC26.21■■□□□ 1.79
RAPGEF3O95398 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
RAPGEF3O95398 EFS-203ENST00000429593 2610 ntTSL 2 BASIC26.2■■□□□ 1.79
RAPGEF3O95398 HARS-203ENST00000431330 1774 ntTSL 2 BASIC26.2■■□□□ 1.79
RAPGEF3O95398 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
RAPGEF3O95398 ACTG1P4-201ENST00000425123 1122 ntBASIC26.2■■□□□ 1.78
RAPGEF3O95398 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 AC069120.2-201ENST00000524091 540 ntBASIC26.2■■□□□ 1.78
RAPGEF3O95398 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC26.2■■□□□ 1.78
RAPGEF3O95398 CLDN5-201ENST00000403084 2357 ntBASIC26.2■■□□□ 1.78
RAPGEF3O95398 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 AKAP8P1-201ENST00000434743 1349 ntBASIC26.19■■□□□ 1.78
RAPGEF3O95398 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
RAPGEF3O95398 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC26.19■■□□□ 1.78
RAPGEF3O95398 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms