Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC23.2■■□□□ 1.3
LTN1O94822 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC23.2■■□□□ 1.3
LTN1O94822 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC23.2■■□□□ 1.3
LTN1O94822 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
LTN1O94822 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
LTN1O94822 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
LTN1O94822 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC23.19■■□□□ 1.3
LTN1O94822 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 THTPA-204ENST00000554970 569 ntTSL 4 BASIC23.19■■□□□ 1.3
LTN1O94822 THTPA-206ENST00000556015 535 ntTSL 3 BASIC23.19■■□□□ 1.3
LTN1O94822 TK1-204ENST00000590430 683 ntTSL 3 BASIC23.19■■□□□ 1.3
LTN1O94822 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 BX323043.1-201ENST00000641006 1765 ntBASIC23.19■■□□□ 1.3
LTN1O94822 CALY-203ENST00000368558 825 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC23.19■■□□□ 1.3
LTN1O94822 ACTG1P14-201ENST00000446382 1122 ntBASIC23.19■■□□□ 1.3
LTN1O94822 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
LTN1O94822 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.19■■□□□ 1.3
LTN1O94822 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC23.19■■□□□ 1.3
LTN1O94822 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.18■■□□□ 1.3
LTN1O94822 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
LTN1O94822 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC23.18■■□□□ 1.3
LTN1O94822 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC23.18■■□□□ 1.3
LTN1O94822 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC23.18■■□□□ 1.3
LTN1O94822 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
LTN1O94822 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
LTN1O94822 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC23.18■■□□□ 1.3
LTN1O94822 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
LTN1O94822 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC23.17■■□□□ 1.3
LTN1O94822 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC23.17■■□□□ 1.3
LTN1O94822 METTL23-205ENST00000588302 925 ntTSL 5 BASIC23.17■■□□□ 1.3
LTN1O94822 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LTN1O94822 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC23.17■■□□□ 1.3
LTN1O94822 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
LTN1O94822 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC23.17■■□□□ 1.3
LTN1O94822 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
LTN1O94822 AC098818.2-201ENST00000564925 2320 ntBASIC23.17■■□□□ 1.3
LTN1O94822 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC23.17■■□□□ 1.3
LTN1O94822 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
LTN1O94822 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.17■■□□□ 1.3
LTN1O94822 AC074386.1-202ENST00000463561 864 ntBASIC23.17■■□□□ 1.3
LTN1O94822 AC005498.2-205ENST00000593218 784 ntBASIC23.17■■□□□ 1.3
LTN1O94822 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
LTN1O94822 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
LTN1O94822 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
LTN1O94822 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.16■■□□□ 1.3
LTN1O94822 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
LTN1O94822 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms