Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 IGHGP-201ENST00000390555 1178 ntBASIC17.91■□□□□ 0.46
USP1O94782 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.91■□□□□ 0.46
USP1O94782 AC092597.1-201ENST00000487352 616 ntBASIC17.91■□□□□ 0.46
USP1O94782 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
USP1O94782 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.91■□□□□ 0.46
USP1O94782 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
USP1O94782 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP1O94782 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.91■□□□□ 0.46
USP1O94782 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.91■□□□□ 0.46
USP1O94782 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 MIR662-201ENST00000384847 95 ntBASIC17.9■□□□□ 0.46
USP1O94782 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.9■□□□□ 0.46
USP1O94782 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 AC112698.1-201ENST00000510299 916 ntBASIC17.9■□□□□ 0.46
USP1O94782 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.9■□□□□ 0.46
USP1O94782 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.9■□□□□ 0.46
USP1O94782 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
USP1O94782 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP1O94782 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP1O94782 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP1O94782 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
USP1O94782 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP1O94782 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP1O94782 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.89■□□□□ 0.45
USP1O94782 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 HOMER2P1-201ENST00000455653 964 ntBASIC17.89■□□□□ 0.45
USP1O94782 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.89■□□□□ 0.45
USP1O94782 AP003733.1-201ENST00000491725 852 ntBASIC17.89■□□□□ 0.45
USP1O94782 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.89■□□□□ 0.45
USP1O94782 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.89■□□□□ 0.45
USP1O94782 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.89■□□□□ 0.45
USP1O94782 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.89■□□□□ 0.45
USP1O94782 AC006011.2-201ENST00000621313 1158 ntBASIC17.89■□□□□ 0.45
USP1O94782 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP1O94782 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms